Project description

kyutils

kyu's utils

some examples:

probe generator: generates probeinterface.Probe objects for the 15um and 20um versions of the Livermore polymer probes
trodesconf generators:
- generates a trodesconf file based on a list of Livermore probe types; e.g. if implanting three Livermore probes (one 15um type and two 20um type) in alternating order, can pass the list [20, 15, 20] and will generate a trodesconf file with the contacts arranged geometrically
- generate a trodesconf file given the number of channels; good for reconfiguring
header parser: parses the header of a SpikeGadgets rec file
behavior parser: given the extracted DIO dat files from a SpikeGadgets rec file, plots the time course of the animal's decisions in the W-track task and indicates rewarded trials

installation: pip install kyutils

for the version that creates figurl, pip install "kyutils[figurl]" and set up kachery cloud.

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