安装

您可以通过运行以下命令安装exdesi：

> pip install --user exdesi

在Linux上，可执行脚本可以在~/.local/bin中找到，在MacOS上，脚本位于/Users/YOURUSERNAME/Library/Python/3.5/bin下。

用法

典型用法如下：

> exdesi.py candidate_directory experimental_variables_file

有关更多选项，您可以按照以下方式请求帮助：

> exdesi.py -h
usage: exdesi.py [-h] [--best_set BEST_SET] [-x EXCLUDE] networkfiles experivarfile

positional arguments:
  networkfiles          directory of influence graphs in SIF format
  experivarfile         experimental variables

optional arguments:
  -h, --help            show this help message and exit
  --best_set BEST_SET   compute best set of experiments maximal number of
                        experiments, default is OFF, 0=unlimited
  -x EXCLUDE, --exclude EXCLUDE
                        exclude experiments described in file EXCLUDE

示例

在data目录中有可用的示例文件。一个示例调用如下：

> exdesi.py in_silico_HEK293/candidates_round1/ in_silico_HEK293/expvars.txt -x in_silico_HEK293/exclude1.txt