Python package to quantify biological structure
Project description
This package is designed to quantify biological structures in 3D image data.
Features
Compare sets of 3D biological images to identify differences
Automatically align the structure in the image to correct for variation introduced during mounting and imaging
Generate descriptive graphs that quantify both the average and variation of the data
Use machine learning techniques to classify samples and identify regions of statistically significant difference
Installation
Package hosted on PyPI.
$ pip install cranium
Support
Complete documentation is available on Read the Docs.
Check out the Frequently Asked Question page.
Submit an issue describing a problem or question on the project’s Github issue tracker.
Contribute
Issue Tracker: https://github.com/msschwartz21/craniumPy/issues
Source Code: https://github.com/msschwartz21/craniumPy
License
This project is licensed under the GNU General Public License.
